Publications
Teleopto
RNA G-quadruplexes form scaffolds that promote neuropathological α-synuclein aggregation
Kazuya Matsuo, Sefan Asamitsu, Kohei Maeda, Hiroyoshi Suzuki, Kosuke Kawakubo, Ginji Komiya, Kenta Kudo, Yusuke Sakai, Karin Hori, Susumu Ikenoshita, Shingo Usuki, Shiori Funahashi, Hideki Oizumi, Atsushi Takeda, Yasushi Kawata, Tomohiro Mizobata, Norifumi Shioda, Yasushi YabukiCell . 2024 Oct 14:S0092-8674(24)01134-6. doi: 10.1016/j.cell.2024.09.037.
An amygdalar oscillator coordinates cellular and behavioral rhythms
Qiang Liu, Jiali Xiong, Dong Won Kim, Sang Soo Lee, Benjamin J Bell, Chloe Alexandre, Seth Blackshaw, Alban Latremoliere, Mark N Wu
Neuron . 2024 Sep 18:S0896-6273(24)00609-3. doi: 10.1016/j.neuron.2024.08.013.
Cell Rep . 2024 Apr 23;43(4):114115. doi: 10.1016/j.celrep.2024.114115.
An Amygdalar Oscillator Coordinates Cellular and Behavioral Rhythms
Qiang Liu, Jiali Xiong, Dong Won Kim, Sang Soo Lee, Benjamin J. Bell, Chloe Alexandre, Seth Blackshaw, Alban Latremoliere, Mark N. Wu
bioRxiv 2024 March doi: https://doi.org/10.1101/2024.03.08.584151
A light-controlled phospholipase C for imaging of lipid dynamics and controlling neural plasticity
Yeon-Jeong Kim, Suguru Tohyama, Takashi Nagashima, Masashi Nagase, Yamato Hida, Shun Hamada, Ayako M Watabe, Toshihisa Ohtsuka
Cell Chem Biol . 2024 Mar 26:S2451-9456(24)00090-4. doi: 10.1016/j.chembiol.2024.03.001.
Eugene Dimitrov
J Integr Neurosci . 2024 Mar 19;23(3):60. doi: 10.31083/j.jin2303060.
Cell Rep Methods . 2024 Mar 15:100740. doi: 10.1016/j.crmeth.2024.100740
Transl Psychiatry . 2024 Jan 25;14(1):60. doi: 10.1038/s41398-024-02769-3.
Neuropsychopharmacol Rep . 2023 Dec 29. doi: 10.1002/npr2.12406.
Remote memory engrams are controlled by encoding-specific tau phosphorylation
Kristie Stefanoska, Emmanuel Prikas, Yijun Lin, Renée Kosonen, Arne IttnerbioRxiv 2023 Dec 3 doi: https://doi.org/10.1101/2023.12.01.569663
Front. Neural Circuits, 29 Nov 2023, Volume 17 https://doi.org/10.3389/fncir.2023.1273322
Makoto Takemoto, Shigeki Kato, Kazuto Kobayashi, Wen-Jie Song
iScience 2023 June 16 Volume 26, Issue 6, bioRxiv https://doi.org/10.1016/j.isci.2023.106985
Emotional association enhances perceptual memory through amygdalo-cortical inputs during NREM sleep
Yoshihito Saito, Yuma Osako, Maya Odagawa, Yasuhiro Oisi, Chie Matsubara, Shigeki Kato, Kazuto Kobayashi, Mitsuhiro Morita, Joshua P. Johansen, Masanori Murayama
bioRxiv 2023 May doi: https://doi.org/10.1101/2023.05.23.541852
Hippocampus as a sorter and reverberatory integrator of sensory inputs
Masanori Nomoto, Emi Murayama, Shuntaro Ohno, Reiko Okubo-Suzuki, Shin-ichi Muramatsu, Kaoru Inokuchi
Nat Commun . 2022 Dec 20;13(1):7413. doi: 10.1038/s41467-022-35119-2.
Distinct roles of dopamine receptor subtypes in the nucleus accumbens during itch signal processing
Tong-Yu Liang, Hua Zhou, Yan-Gang Sun
J Neurosci . 2022 Oct 13;JN-RM-0821-22. doi: 10.1523/JNEUROSCI.0821-22.2022.
Morgan Be´rard, Razan Sheta, Sarah Malvaut, Raquel Rodriguez-Aller, Maxime Teixeira, Walid Idi, Roxanne Turmel, Melanie Alpaugh, Marilyn Dubois, Manel Dahmene, Charleen Salesse, Je´roˆme LamontagneProulx, Marie-Kim St-Pierre, Omid Tavassoly , Wen Luo, Esther Del CidPellitero, Raza Qazi, Jae-Woong Jeong, Thomas M. Durcan, Luc Vallières, Marie-Eve Tremblay, Denis Soulet, Martin Le´vesque, Francesca Cicchetti, Edward A. Fon, Armen Saghatelyan, Abid Oueslati
PLoS Biol . 2022 Mar 9;20(3):e3001578. doi: 10.1371/journal.pbio.3001578. eCollection 2022 Mar
Makoto Takemoto, Shigeki Kato, Kazuto Kobayashi, Wen-Jie Song
bioRxiv doi: https://doi.org/10.1101/2022.06.15.494020
Claustrum mediates bidirectional and reversible control of stress-induced anxiety responses
Misaki Niu, Atsushi Kasai, Masato Tanuma, Kaoru Seiriki, Hisato Igarashi, Takahiro Kuwaki, Kazuki Nagayasu, Keita Miyaji, Hiroki Ueno, Wataru Tanabe, Kei Seo, Rei Yokoyama, Jin Ohkubo, Yukio Ago, Misuzu Hayashida, Ken-Ichi Inoue, Masahiko Takada, Shun Yamaguchi, Takanobu Nakazawa, Shuji Kaneko, Hiroyuki Okuno, Akihiro Yamanaka, Hitoshi Hashimoto
Sci Adv . 2022 Mar 18;8(11):eabi6375. doi: 10.1126/sciadv.abi6375
Role of Autism Risk Genes on Frontal-Thalamic Projections Underlying Social Processing in Mice
Brandon Stevens
Icahn School of Medicine at Mount Sinai ProQuest Dissertations Publishing, 2022. 29254523.
Bianca Sieveritz, Shannon Hayashi Duke, Jeffery R. Wickens, Gordon W. Arbuthnott
bioRxiv doi: https://doi.org/10.1101/2022.02.11.480170
In Vivo Wireless Optogenetic Control of Skilled Motor Behavior
Diana L Rodriguez-Munoz, Omar Jaidar, Marcela Palomero-Rivero, Mario A Arias-Garcia, Gordon W Arbuthnott, Violeta G Lopez-Huerta
J Vis Exp . 2021 Nov 22:(177). doi: 10.3791/63082.
Xiao-Jun Chen, Yan-He Liu, Ning-Long Xu, Yan-Gang Sun
J Neurosci . 2021 Oct 29;JN-RM-1445-21. doi: 10.1523/JNEUROSCI.1445-21.2021.
Optogenetic activation of DRN 5-HT neurons induced active wakefulness, not quiet wakefulness
Rika Moriya, Mitsuko Kanamaru, Naoki Okuma, Akira Yoshikawa, Kenji F Tanaka, Satoshi Hokari, Yasuyoshi Ohshima, Akihiro Yamanaka, Motoyasu Honma, Hiroshi Onimaru, Toshiaki Kikuchi, Masahiko Izumizaki
Brain Res Bull . 2021 Sep 24;177:129-142. doi: 10.1016/j.brainresbull.2021.09.019.
Mariko Ito, Masashi Nagase, Suguru Tohyama, Kaori Mikami, Fusao Kato, Ayako M. Watabe
Mol Brain . 2021 Jun 24;14(1):94. doi: 10.1186/s13041-021-00807-5.
Mariacristina Mazzitelli, Kendall Marshall, Andrew Pham, Guangchen, Volker Neugebauer
Front Pharmacol. (2021) May 25;12:668337. doi: 10.3389/fphar.2021.668337
Post-error recruitment of frontal sensory cortical projections promotes attention in mice
Kevin J. Norman, Justin S. Riceberg, Hiroyuki Koike, Julia Bateh, Sarah E. McCraney, Keaven Caro, Daisuke Kato, Ana Liang, Kazuhiko Yamamuro, Meghan E. Flanigan, Korey Kam, Elisa N. Falk, Daniel M. Brady, Christina Cho, Masato Sadahiro, Kohei Yoshitake, Priscilla Maccario, Michael P. Demars, Leah Waltrip, Andrew W. Varga, Scott J. Russo, Mark G. Baxter, Matthew L. Shapiro, Peter H. Rudebeck, Hirofumi Morishita
Neuron (2021) Feb doi: 10.1016/j.neuron.2021.02.001
Astrocytic cAMP modulates memory via synaptic plasticity
Zhiwen Zhou, Kazuki Okamoto, Junya Onodera, Toshimitsu Hiragi, Megumi Andoh, Masahito Ikawa, Kenji F Tanaka, Yuji Ikegaya, Ryuta Koyama
Proc Natl Acad Sci U S A . 2021 Jan 19;118(3):e2016584118. doi: 10.1073/pnas.2016584118.
Striatal bilateral control of skilled forelimb movement
Violeta G Lopez-Huerta, Jai A Denton, Yoko Nakano, Omar Jaidar, Marianela Garcia-Munoz, Gordon W Arbuthnott
Cell Rep. (2021) Jan 19;34(3):108651. doi: 10.1016/j.celrep.2020.108651.
Kappa opioid receptor activation in the amygdala disinhibits CRF neurons to generate pain-like behaviors
Matthew Heina, Guangchen Ji, Dalton Tidwell, Preston D'Souza, Takaki Kiritoshi, Vadim Yakhnitsa, Edita Navratilova, Frank Porreca, Volker Neugebauer
Neuropharmacology (2021) Jan 12;185:108456. doi: 10.1016/j.neuropharm.2021.108456
Srikanta Chowdhury, Akihiro Yamanaka
Adv Exp Med Biol. 2021;1293:407-416. doi: 10.1007/978-981-15-8763-4_26.
Megan Leigh Rudolph
Arizona State University 2020 August
Oxytocin Influences Male Sexual Activity via Non-synaptic Axonal Release in the Spinal Cord
Takumi Oti, Keita Satoh, Daisuke Uta, Junta Nagafuchi, Sayaka Tateishi, Ryota Ueda, Keiko Takanami, Larry J Young, Antony Galione, John F Morris, Tatsuya Sakamoto, Hirotaka Sakamoto
Curr Biol. 2020 Oct 23;S0960-9822(20)31502-5. doi: 10.1016/j.cub.2020.09.089.
Yajie Sun, Lei Qian, Li Xu, Sarah Hunt, Pankaj Sah
Molecular Psychiatry (2020) Oct 1; doi: 10.1038/s41380-020-00894-1
Lucy King Bicks
Icahn School of Medicine at Mount Sinai ProQuest Dissertations Publishing, 2020. 28094880The University of Arizona ProQuest Dissertations Publishing, 2020. 27736945
Zachary George Yellowman
The University of Arizona ProQuest Dissertations Publishing, 2020. 27736945.
A prefrontal–paraventricular thalamus circuit requires juvenile social experience to regulate adult sociability in mice
Kazuhiko Yamamuro, Lucy K. Bicks, Michael B. Leventhal, Daisuke Kato, Susanna Im, Meghan E. Flanigan, Yury Garkun, Kevin J. Norman, Keaven Caro, Masato Sadahiro, Klas Kullander, Schahram Akbarian, Scott J. Russo, Hirofumi Morishita
Nature Neuroscience (2020) Oct; 23(10): 1240-1252. doi: 10.1038/s41593-020-0695-6
Hiroshi Kuniishi, Daisuke Yamada, Keiji Wada, Mitsuhiko Yamada, Masayuki Sekiguchi
Translational Psychiatry 2020 May; 10(1) doi: 10.1038/s41398-020-0837-3
Cristian S Bernabe, Izabela F Caliman, William A Truitt, Andrei I Molosh, Christopher A Lowry, Anders Hay-Schmidt, Anantha Shekhar, Philip L Johnson
J Psychopharmacol. 2020 Apr;34(4):400-411. doi: 10.1177/0269881119900981. Epub 2020 Mar 10.
Prefrontal parvalbumin interneurons require juvenile social experience to establish adult social behavior
Lucy K. Bicks, Kazuhiko Yamamuro, Meghan E. Flanigan, Julia Minjung Kim, Daisuke Kato, Elizabeth K. Lucas, Hiroyuki Koike, Michelle S. Peng, Daniel M. Brady, Sandhya Chandrasekaran, Kevin J. Norman, Milo R. Smith, Roger L. Clem, Scott J. Russo, Schahram Akbarian, Hirofumi Morishita
Nature Communications 2020 Feb 21;11(1):1003. DOI: 10.1038/s41467-020-14740-z
Dissecting the Functional Heterogeneity of Serotonergic Systems That Regulate Fear and Panic
Cristian Setubal Bernabe
IUPUI ScholarWorks Repository 2019 http://dx.doi.org/10.7912/C2/2077
REM sleep-active MCH neurons are involved in forgetting hippocampus dependent memories
Shuntaro Izawa, Srikanta Chowdhury, Toh Miyazaki, Yasutaka Mukai, Daisuke Ono, Ryo Inoue, Yu Ohmura, Hiroyuki Mizoguchi, Kazuhiro Kimura, Mitsuhiro Yoshioka, Akira Terao, Thomas S. Kilduff, Akihiro Yamanaka
Science 2019 Sep; Vol.365, Issue 6459, pp. 1308-1313 DOI: 10.1126/science.aax9238
Yoshifumi Abe, Yuji Komaki, Fumiko Seki, Shinsuke Shibata, Hideyuki Okano, Kenji F. Tanaka
Neurochem Int. 2019 May; 125:163-174. DOI: 10.1016/j.neuint.2019.02.017.
Risa Sueda, Itaru Imayoshi, Yukiko Harima, Ryoichiro Kageyama
Genes Dev. 2019 Mar 12 DOI: 10.1101/gad.323196.118.
Jiaojiao Song, Da Shao, Xinli Guo, Yanfang Zhao, Dongyang Cui, Qianqian Ma, Huan Sheng, Lan Ma, Bin Lai, Ming Chen, Ping Zheng
Science Advances 2019 Feb 20;5(2):eaat3210. DOI: 10.1126/sciadv.aat3210.
Omar Jáidar, Luis Carrillo-Reid, Yuko Nakano, Violeta Gisselle Lopez-Huerta, Arturo Hernandez-Cruz, José Bargas, Marianela Garcia-Munoz, Gordon William Arbuthnott
Eur J Neurosci. 2019 Jan 11. DOI: 10.1111/ejn.14344
Roger Marek, Li Xu, Robert K. P. Sullivan, Pankaj Sah
Nature Neuroscience (2018) 21(5):654-658. DOI: 10.1038
Philipp Gutruf, Cameron H. Good, John A. Rogers
APL Photonics 3, 120901 (2018); https://doi.org/10.1063/1.5040256
Top-down cortical input during NREM sleep consolidates perceptual memory.
Miyamoto D, Hirai D, Fung CCA, Inutsuka A, Odagawa M, Suzuki T, Boehringer R, Adaikkan C, Matsubara C, Matsuki N, Fukai T, McHugh TJ, Yamanaka A, Murayama M
Science (2016) 352(6291): 1315-8. DOI: 10.1126
Isosaka T, Matsuo T, Yamaguchi T, Funabiki K, Nakanishi S, Kobayakawa R, Kobayakawa K
Cell (2015) 163(5):1153-64
A Top-Down Cortical Circuit for Accurate Sensory Perception.
Manita S, Suzuki T, Homma C, Matsumoto T, Odagawara M, Yamada K, Ota K, Matsubara C, Inutsuka A, Sato M, Ohkura M, Yamanaka A, Yanagawa Y, Nakai J, Hayashi Y, Larkum ME, Murayama M
Neuron (2015) 86:1304-16
The lateral parabrachial nucleus is actively involved in the acquisition of fear memory in mice.
Sato M, Ito M, Nagase M, Sugimura YK, Takahashi Y, Watabe AM, Kato F
Molecular Brain (2015) 8:22
TeleFipho
Protocol for synchronized wireless fiber photometry and video recordings in rodents during behavior
Suhel Tamboli, Dimitry Topolnik, Risna Radhakrishnan, Daphnée Veilleux-Lemieux, Lisa TopolnikSTAR Protoc . 2024 Oct 18;5(4):103407. doi: 10.1016/j.xpro.2024.103407.
Sci Signal . 2024 Sep 10;17(853):eado9852. doi: 10.1126/scisignal.ado9852. Epub 2024 Sep 10.
bioRxiv 2024 September 19. doi: https://doi.org/10.1101/2024.09.16.613257
Cell Rep . 2024 Apr 23;43(4):114115. doi: 10.1016/j.celrep.2024.114115.
Wake Forest University. 2024 May
Mol Psychiatry . 2024 Feb 23. doi: 10.1038/s41380-024-02419-6.
Felix Michaud, Ruggiero Francavilla, Dimitry Topolnik, Parisa Iloun, Suhel Tamboli, Frederic Calon, Lisa Topolnik
bioRxiv 2024 Jan. doi: https://doi.org/10.1101/2024.01.12.575331NMDAR Phosphoproteome Controls Synaptic Growth and Learning
Yasuhiro Funahashi, Rijwan Uddin Ahammad, Xinjian Zhang, Emran Hossen, Masahiro Kawatani, Shinichi Nakamuta, Akira Yoshimi, Minhua Wu, Huanhuan Wang, Mengya Wu, Xu Li, Md Omar Faruk, Md Hasanuzzaman Shohag, You-Hsin Lin, Daisuke Tsuboi, Tomoki Nishioka, Keisuke Kuroda, Mutsuki Amano, Yukihiko Noda, Kiyofumi Yamada, Kenji Sakimura, Taku Nagai, Takayuki Yamashita, Shigeo Uchino, Kozo Kaibuchi
bioRxyv 2023 Dec doi: https://doi.org/10.1101/2023.12.15.571360
Hulshof, Lauren Genevieve
Northeastern University 2023 April, doi: https://doi.org/10.17760/D20483135Yuta Tamatsu, Hirotsugu Azechi, Riku Takahashi, Fumiya Sawatani, Kaoru Ide, Fumino Fujiyama, Susumu Takahashi
iScience 2023 Dec. Volume 26, Issue 12, doi: https://doi.org/10.1016/j.isci.2023.108536Atsushi Kasai, Rei Yokoyama, Yukio Ago, Hisato Igarashi, Momoko Higuchi, Masato Tanuma, Yuto Shimazaki, Kaoru Seiriki, Misuzu Hayashida, Shun Yamaguchi, Hirokazu Tanaka, Takanobu Nakazawa, Kenji Hashimoto, Hitoshi Hashimoto
Research Square 2023 Sep. https://www.researchsquare.com/article/rs-3305430/...Alcohol inhibits sociability via serotonin inputs to the nucleus accumbens
Ruixiang Wang, Kanza M. Khan, Nagalakshmi Balasubramanian, Thomas James, Selvakumar Govindhasamy Pushpavathi, David Kim, Samantha Pierson, Qi Wu, Mark J. Niciu, Marco M. Hefti, Catherine A. Marcinkiewcz
bioRxyv 2023 May. doi: https://doi.org/10.1101/2023.05.29.542761Sona Amalyan, Suhel Tamboli, Ivan Lazarevich, Dimitry Topolnik, Leandra Harriet Bouman, Lisa Topolnik
Cell Rep . 2022 Jul 5;40(1):111043. doi: 10.1016/j.celrep.2022.111043
HCN2 in cholinergic interneurons of the nucleus accumbens mediates reward response
J Lee, M Weinberger, Y Kawahara, J Cheng, G Umschweif, L Medrihan, M Flajolet, A Nishi, Y Sagi
bioRxiv 2021 Sep, doi: https://doi.org/10.1101/2021.09.21.460269
Activation of septal OXTr neurons induces anxiety- but not depressive-like behavior
Tuanjie Huang, Fangxia Guan, Julio Licinio, Ma-Li Wong, Yunlei Yang
Mol Psychiatry. (2021) Sep 6. doi: 10.1038/s41380-021-01283-y.
Andrea Cardenas, Alexander Papadogiannis, Eugene Dimitrov
FASEB J. (2021) Jul;35(7):e21747. doi: 10.1096/fj.202100319RR.
TeleFiOpto
Cell Rep . 2024 Apr 23;43(4):114115. doi: 10.1016/j.celrep.2024.114115.
Yuta Tamatsu, Hirotsugu Azechi, Riku Takahashi, Fumiya Sawatani, Kaoru Ide, Fumino Fujiyama, Susumu Takahashi
iScience 2023 Dec. Volume 26, Issue 12, doi: https://doi.org/10.1016/j.isci.2023.108536
VTS-4
Yue Qi, Nicola J Lee, Chi Kin Ip, Ronaldo Enriquez, Ramon Tasan, Lei Zhang, Herbert Herzog
Cell Metab . 2023 May 10;S1550-4131(23)00177-8. doi: 10.1016/j.cmet.2023.04.020.
SatB2-Expressing Neurons in the Parabrachial Nucleus Encode Sweet Taste.
Ou Fu, Yuu Iwai, Kunio Kondoh, Takumi Misaka, Yasuhiko Minokoshi, Kenichiro Nakajima
Cell Reports 2019 May; 7;27(6): 1650-1656.e4. DOI: 10.1016/j.celrep.2019.04.040.
LED Array
Joleen Cheah
Stanford University ProQuest Dissertations & Theses, 2024. 31643292.
Assays to measure small molecule Hsp70 agonist activity in vitro and in vivo
Olivia Shapiro, Clara Woods, Amanda M. Gleixner, Sara Sannino, Marilyn Ngo, Michael D. McDaniels, Peter Wipf, Neil A. Hukriede, Christopher J. Donnelly, Jeffrey L. Brodsky
Anal Biochem . 2024 Nov 9:697:115712. doi: 10.1016/j.ab.2024.115712.Chalaisorn Thanapongpibul, Omar Rifaie-Graham, Miina Ojansivu, Adrian Najer, Hyemin Kim, Saskia E. Bakker, Mohamed Chami, David J. Peeler, Chenchen Liu, Jonathan Yeow, Molly M. Stevens
Adv Mater . 2024 Oct 17:e2408000. doi: 10.1002/adma.202408000Samia Alam
CUNY Bernard M Baruch College 2024
Nanoscale Tools for Biosensing and Treatment of Bacterial Biofilms and Eukaryotic Cells
Charlotte Kromer
Freie Universitat Berlin 2024. doi.org/10.17169/refubium-44048Optogenetic tools for inducing organelle membrane rupture
Yuto Nagashima, Tomoya Eguchi, Ikuko Koyama-Honda, Noboru Mizushima
BioRxyv 2024 Aug doi: https://doi.org/10.1101/2024.08.13.607738
Shuang Shi, Yang Zheng, Joëlle Goulding, Silvia Marri, Laura Lucarini, Benjamin Konecny, Silvia Sgambellone, Serafina Villano, Reggie Bosma, Maikel Wijtmans, Stephen J. Briddon, Barbara A. Zarzycka, Henry F. Vischer, Rob Leurs
Biochem. Pharmacol. 2024 June 26. https://doi.org/10.1016/j.bcp.2024.116396
Silvia Panarello, Aleix González-Díez, Alice E. Berizzi, Fanny Malhaire Roser Borràs-Tudurí Xavier Rovira Carme Serra Laurent Prézeau Jean-Philippe Pin Cyril Goudet Amadeu Llebaria Xavier Gómez-Santacana
iScience. 2024 May 28. https://doi.org/10.1016/j.bcp.2024.116396
Detecting material state changes in the nucleolus by label-free digital holographic microscopy
Christiane Zorbas, Aynur Soenmez, Jean Léger, Christophe De Vleeschouwer, Denis Lj Lafontaine
EMBO Rep . 2024 Apr 23. doi: 10.1038/s44319-024-00134-5
Mitochondrial energy state controls AMPK-mediated foraging behavior in C. elegans
Anežka Vodičková, Annika Müller-Eigner, Chidozie N Okoye, Andrew P Bischer, Jacob Horn, Shon A Koren, Nada Ahmed Selim, Andrew P Wojtovich
Sci Adv . 2024 Apr 19;10(16):eadm8815. doi: 10.1126/sciadv.adm8815.
Samia Alam
CUNY Academic Works. 2024 May
Sujeong Lee, Hye Jin Kim, Jin-Ho Choi, Hye Jung Jang, Hui Bang Cho, Hye-Ryoung Kim, Ji-in Park, Kyung-soon Park, Keun-Hong Park
J Control Release . 2024 Apr:368:756-767. doi: 10.1016/j.jconrel.2024.03.027.
Reduction of nanoparticle size and promotion of cell membrane permeability by LED irradiation
Hui Bang Cho, Hye Jin Kim, Sujin Lee, Hye-Ryoung Kim, Sujeong Lee, Ji-In Park, Keun-Hong Park
Materials Today Nano. 2023 Dec; Volume 24, 100397. https://doi.org/10.1016/j.mtnano.2023.100397
Hui Bang Cho, Hye Jin Kim, Hye-Ryoung Kim, Sujeong Lee, Ji-In Park, Keun-Hong Park
Chemical Engineering Journal. 2023 Oct; Volume 473, 145269. https://doi.org/10.1016/j.cej.2023.145269
Dynamic mapping of proteome trafficking within and between living cells by TransitID
Wei Qin Xu, Joleen S. Cheah, Charles Xu, James Messing, Brian D. Freibaum, Steven Boeynaems, J. Paul Taylor, Namrata D. Udeshi, Steven A. Carr, Alice Y. Ting
Cell 2023 June, DOI:https://doi.org/10.1016/j.cell.2023.05.044
A modular toolbox for the optogenetics deactivation of transcription
Philipp Muench, Matteo Fiumara, Nicholas Southern, Davide Coda, Sabine Aschenbrenner, Bruno Correia, Johannes Gräff, Dominik Niopek, Jan MathonybioRxiv 2023 Nov doi: https://doi.org/10.1101/2023.11.06.565805
ROS generating BODIPY loaded nanoparticles for photodynamic eradication of biofilms
Charlotte Kromer, Karin Schwibbert, Sebastian Radunz, Dorothea Thiele, Peter Laux, Andreas Luch, Harald R. TschicheFront Microbiol . 2023 Oct 12:14:1274715. doi: 10.3389/fmicb.2023.1274715
Lateral preoptic area glutamate neurons relay nociceptive information to the ventral tegmental area
David J. Barker, Shiliang Zhang, Huiling Wang, David J. Estrin, Jorge Miranda-Barrientos, Bing Liu, Rucha J. Kulkarni, Junia Lara de Deus, and Marisela MoralesCell Reports. 2023 Aug. DOI:https://doi.org/10.1016/j.celrep.2023.113029
Small-Molecule Drug Repurposing for Counteracting Phototoxic A2E Aggregation
Amelie Perron, Sathi Mandal, Thiago Negrão Chuba, Di Mao, Vaibhav Pal Singh, Naotaka Noda, Russell Tan, Hue Thi Vu, Masahiro Abo, Motonari UesugiACS Chem. Biol. 2023 Sep. https://doi.org/10.1021/acschembio.3c00339
Photochem. Photobiol. 2023 Aug. DOI:10.1007/s43630-023-00470-wDOI:10.1007/s43630-023-00470-w
bioRxyv. July 12, 2023.doi: https://doi.org/10.1101/2023.07.10.548322
Song-Yi Lee, Joleen S. Cheah, Boxuan Zhao, Charles Xu, Heegwang Roh, Christina K. Kim, Kelvin F. Cho, Namrata D. Udeshi, Steven A. Carr & Alice Y. Ting
Nat Methods (2023). https://doi.org/10.1038/s41592-023-01880-5
Validating a New In Vivo Model to Study ALS
Izabela J. Cimachowska
Cuny Academic Works, Spring 5-1 2023
Optogenetic rejuvenation of mitochondrial membrane potential extends C. elegans lifespan
Brandon J Berry, Anežka Vodičková, Annika Müller-Eigner, Chen Meng, Christina Ludwig, Matt Kaeberlein, Shahaf Peleg, Andrew P Wojtovich
Nat Aging . 2023 Feb;3(2):157-161. doi: 10.1038/s43587-022-00340-7. Epub 2022 Dec 30.
Song-Yi Lee, Joleen S. Cheah, Boxuan Zhao, Charles Xu, Heegwang Roh, Christina K. Kim, Kelvin F. Cho, Namrata D. Udeshi, Steven A. Carr, Alice Y. Ting
bioRxiv 2023 Mar, doi: https://doi.org/10.1101/2023.03.09.531939
Dynamic mapping of proteome trafficking within and between living cells by TransitID
Wei Qin Xu, Joleen S. Cheah, Charles Xu, James Messing, Brian D. Freibaum, Steven Boeynaems, J. Paul Taylor, Namrata D. Udeshi, Steven A. Carr, Alice Y. Ting
bioRxiv 2023 Feb, doi: https://doi.org/10.1101/2023.02.07.527548
Carlson, David and Kowaleswski, Mark and Lietzan, Adam and Hughes, Philip and Gooden, David and Loiselle, David and Alcorta, David and Dingman, Zoey and Bodoor, Khaldon and Mueller, Elizabeth and irnov, irnov and Modla, Shanon and Chaya, Tim and Caplan, Jeffrey and Embers, Monica and Miller, Jennifer and Jacobs-Wagner, Christine and Redinbo, Matthew R. and Spector, Neil and Haystead, Timothy
Cell Chemical Biology 2023 Nov doi.org/10.1016/j.chembiol.2023.10.004
In cellulo light-induced dynamics in a BODIPY-perylene dyad
Tingxiang Yang, Ruben Arturo Arellano-Reyes, Rhianne C. Curley, Keshav Kumar Jha, Avinash Chettri, Tia E. Keyes, Benjamin Dietzek-Ivansic
Chemistry . 2023 Feb 17;e202300224. doi: 10.1002/chem.202300224
Makoto Takeuchi, Toshihiko Nishisho, Shunichi Toki, Shinji Kawaguchi, Shunsuke Tamaki, Takeshi Oya, Yoshihiro Uto, Toyomasa Katagiri, Koichi Sairyo
Cancer Med . 2023 Feb 1. doi: 10.1002/cam4.5664
Visible-Light-Controlled Histone Deacetylase Inhibitors for Targeted Cancer Therapy
Laia Josa-Culleré, Amadeu Llebaria
J Med Chem. 2023 Jan 18. doi: 10.1021/acs.jmedchem.2c01713
Network-driven intracellular cAMP coordinates circadian rhythm in the suprachiasmatic nucleus
Daisuke Ono, Huan Wang, Chi Jung Hung, Hsin-Tzu Wang, Naohiro Kon, Akihiro Yamanaka, Yulong Li, Takashi Sugiyama
Sci Adv . 2023 Jan 4;9(1):eabq7032. doi: 10.1126/sciadv.abq7032. Epub 2023 Jan 4.
David Carlson et al.
SSRN 2023
Anna Duran-Corbera, Joan Font, Melissa Faria, Eva Prats, Marta Consegal, Juanlo Catena, Lourdes Muñoz, Demetrio Raldua, Antonio Rodriguez-Sinovas, Amadeu Llebaria, Xavier Rovira
iScience, Volume 25, Issue 10, 21 October 2022 https://doi.org/10.1016/j.isci.2022.105128
Optogenetic rejuvenation of mitochondrial membrane potential extends C. elegans lifespan
Brandon J. Berry, Anežka Vodičková, Annika Müller-Eigner, Chen Meng, Christina Ludwig, Matt Kaeberlein, Shahaf Peleg, Andrew P. Wojtovich
bioRxiv doi: https://doi.org/10.1101/2022.05.11.491574
Design and development of photoswitchable DFG-Out RET kinase inhibitors
Yongjin Xu, Chunxia Gao, Måns Andreasson, Liliana Håversen, Marta P Carrasco, Cassandra Fleming, Thomas Lundbäck, Joakim Andréasson, Morten Grøtli
Eur J Med Chem . 2022 Mar 10;234:114226. doi: 10.1016/j.ejmech.2022.114226
Chady Nasrallah, Giuseppe Cannone, Julie Briot, Karine Rottier, Alice E Berizzi, Chia-Ying Huang, Robert B Quast, Francois Hoh, Jean-Louis Banères, Fanny Malhaire, Ludovic Berto, Anaëlle Dumazer, Joan Font-Ingles, Xavier Gómez-Santacana, Juanlo Catena, Julie Kniazeff, Cyril Goudet, Amadeu Llebaria, Jean-Philippe Pin, Kutti R Vinothkumar, Guillaume Lebon
Cell Rep . 2021 Aug 31;36(9):109648. doi: 10.1016/j.celrep.2021.109648.
Yue Zhang, Huadong Luo, Huiyong Ma, Jinqiao Wan, Yue Ji, Alex Shaginian, Jin Li, Yun Deng, Guansai Liu
Bioconjugate Chem. 2021 Aug, 32, 8, 1576-1580. https://doi.org/10.1021/acs.bioconjchem.1c00346
Synaptic disruption and CREB-regulated transcription are restored by K + channel blockers in ALS
Alberto Catanese, Sandeep Rajkumar, Daniel Sommer, Dennis Freisem, Alexander Wirth, Amr Aly, David Massa-López, Andrea Olivieri, Federica Torelli, Valentin Ioannidis, Joanna Lipecka, Ida Chiara Guerrera, Daniel Zytnicki, Albert Ludolph, Edor Kabashi, Medhanie A Mulaw, Francesco Roselli, Tobias M Böckers
EMBO Mol Med . 2021 Jul 7;13(7):e13131. doi: 10.15252/emmm.202013131. Epub 2021 Jun 14.
Self-organization of human dorsal-ventral forebrain structures by light induced SHH
Riccardo De Santis, Fred Etoc, Edwin A Rosado-Olivieri, Ali H Brivanlou
Nat Commun . 2021 Nov 19;12(1):6768. doi: 10.1038/s41467-021-26881-w.
Jorine M Eeftens, Manya Kapoor, Davide Michieletto, Clifford P Brangwynne
Nat Commun . 2021 Oct 7;12(1):5888. doi: 10.1038/s41467-021-26147-5.
Optical Control of CD8+ T Cell Metabolism and Effector Functions
Andrea M. Amitrano, Brandon J. Berry, Kihong Lim, Kyun-Do Kim, Richard E. Waugh, Andrew P. Wojtovich, Minsoo Kim
Front Immunol . 2021 Jun 3;12:666231. doi: 10.3389/fimmu.2021.666231. eCollection 2021.
Tomoya Uchimura, Toshifumi Asano, Takao Nakata, Akitsu Hotta, Hidetoshi Sakurai
Cell Rep Med . 2021 Jun 4;2(6):100298. doi: 10.1016/j.xcrm.2021.100298. eCollection 2021 Jun 15.
Anna Stierschneider, Petra Grünstäudl, Katrin Colleselli, Josef Atzler, Christian T Klein, Harald Hundsberger, Christoph Wiesner
Int J Mol Sci . 2021 Aug 26;22(17):9232. doi: 10.3390/ijms22179232.
Shinkuro Yamamoto, Taku Nakayama, Hitomi Seki, Chiaki Kawada, Hideo Fukuhara, Takashi Karashima, Shun-Ichiro Ogura, Keiji Inoue
Photodiagnosis Photodyn Ther. 2021 Jun 30;102427. doi: 10.1016/j.pdpdt.2021.102427.
Taku Nakayama, Tomonori Sano, Yoshiki Oshimo, Chiaki Kawada, Moe Kasai, Shinkuro Yamamoto, Hideo Fukuhara, Keiji Inoue, Shun-ichiro Ogura
Sci Rep . 2021 Mar 31;11(1):7290. doi: 10.1038/s41598-021-86886-9.
Chromatin mechanics dictates subdiffusion and coarsening dynamics of embedded condensates
Daniel S. W. Lee, Ned S. Wingreen, Clifford P. Brangwynne
Nature Physics 2021 Jan, DOI: 10.1038/s41567-020-01125-8
Daisuke Ono, Yasutaka Mukai, Chi Jung Hung, Srikanta Chowdhury, Takashi Sugiyama, Akihiro Yamanaka
Sci Adv . 2020 Nov 6;6(45):eabd0384. doi: 10.1126/sciadv.abd0384.
Epigenetic memory as a time integral over prior history of Polycomb phase separation
Jorine M. Eeftens, Manya Kapoor, Clifford P. Brangwynne
bioRxiv 2020 Aug, DOI: 10.1101/2020.08.19.254706
Mechanistic insights into light-driven allosteric control of GPCR biological activity
Maria Ricart Ortega , Alice E. Berizzi, Vanessa Pereira, Fanny Malhaire, Juanlo Catena, Joan Font, Xavier Gomez-Santacana, Lourdes Muñoz, Charleine Zussy, Carmen Serra, xavier Rovira, Cyril Goudet, and Amadeu Llebaria
ACS Pharmacol. Transl. Sci. 2020Aug DOI: 10.1021/acsptsci.0c00054
Light-Activated Antifungal Properties of Imidazolium-Functionalized Cationic Conjugated Polymers
Jagadesan, P., Yu, Z., Barboza-Ramos, I., Lara, H. H., Vazquez-Munoz, R., López-Ribot, J. L., & Schanze, K. S.
Chemistry of Materials 2020, 32(14), 6186-6196.
Photoswitchable Antagonists for a Precise Spatiotemporal Control of β2-Adrenoceptors
Anna Duran-Corbera , Juanlo Catena, Marta Otero-Viñas, Amadeu Llebaria, Xavier Rovira
J. Med. Chem. 2020, 63, 15, 8458-8470 DOI: 10.1021/acs.jmedchem.0c00831
Controlling the material properties and rRNA processing function of the nucleolus using light.
Lian Zhu, Tiffany M. Richardson, Ludivine Wacheul, Ming-Tzo Wei, Marina Feric, Gena Whitney, Denis L. J. Lafontaine, Clifford P. Brangwynne
Proc Natl Acad Sci U. S. A. 2019 Aug 9. pii: 201903870. DOI: 10.1073/pnas.1903870116.
On-DNA Decarboxylative Arylation: Merging Photoredox with Nickel Catalysis in Water
Dominik K Kölmel, Jiang Meng, Mei-Hsuan Tsai, Jiamin Que, Richard P Loach, Thomas Knauber, Jinqiao Wan, Mark E Flanagan
ACS Comb Sci . 2019 Aug 12;21(8):588-597. doi: 10.1021/acscombsci.9b00076
Thomas Westergard, Kevin McAvoy, Katelyn Russell, Xinmei Wen, Yu Pang, Brandie Morris, Piera Pasinelli, Davide Trotti, Aaron Haeusler
EMBO Mol Med. 2019 Feb; 11(2). pii: e9423. DOI: 10.15252/emmm.201809423.
Optogenetic Place Aversion (OPA)
Toyoaki Maruta, Kotaro Hidaka, Satoshi Kouroki, Tomohiro Koshida, Mio Kurogi, Yohko Kage, Seiya Mizuno, Tetsuro Shirasaka, Toshihiko Yanagita, Satoru Takahashi, Ryu Takeya, Isao Tsuneyoshi
PLoS One . 2022 Oct 6;17(10):e0275751. doi: 10.1371/journal.pone.0275751.
ELG-2
Sleep-wake patterns are altered with age, Prdm13 signaling in the DMH, and diet restriction in mice
Shogo Tsuji, Cynthia S Brace, Ruiqing Yao, Yoshitaka Tanie, Hirobumi Tada, Nicholas Rensing, Seiya Mizuno, Julio Almunia, Yingyi Kong, Kazuhiro Nakamura, Takahisa Furukawa, Noboru Ogiso, Shinya Toyokuni, Satoru Takahashi, Michael Wong, Shin-Ichiro Imai, Akiko Satoh
Life Sci Alliance . 2023 Apr 12;6(6):e202301992. doi: 10.26508/lsa.202301992
Shogo Tsuji, Cynthia S Brace, Ruiqing Yao, Yoshitaka Tanie, Hirobumi Tada, Nicholas Rensing, Seiya Mizuno, Julio Almunia, Yingyi Kong, Kazuhiro Nakamura, Noboru Ogiso, Shinya Toyokuni, Satoru Takahashi, Michael Wong, Shin-ichiro Imai, Akiko Satoh
bioRxiv. 2022 Sep; doi: https://doi.org/10.1101/2022.09.26.509442
The claustrum coordinates cortical slow-wave activity
Kimiya Narikiyo, Rumiko Mizuguchi, Ayako Ajima, Momoko Shiozaki, Hiroki Hamanaka, Joshua P. Johansen, Kensaku Mori, Yoshihiro Yoshihara
Nature Neuroscience (2020) 23:741-753. DOI: 10.1038/s41593-020-0625-7